Biobase

Overview

Biobase offers expert-curated biological databases, software and services for the life sciences. Products include HGMD - a database of published human inherited disease mutations, TRANSFAC - knowledge-base containing published data on eukaryotic transcription factors and miRNAs, their experimentally-proven binding sites, and regulated genes, POSSUMweb - a dysmorphology database of syndromes including multiple malformations, chromosomal abnormalities, skeletal dysplasias, and metabolic disorders, ANNOVAR - Perl program to functionally annotate genetic variants from high-throughput sequencing data, was developed to fill this need to shortlist single nucleotide variants and insertions/deletions, BRENDA - collection of enzyme functional data available to the scientific community worldwide, classified according to the Enzyme Commission list of enzymes, BIOBASE PGMD - a resource for identifying all published genetic variants that have been shown to affect drug response in patients, and Genome Trax - database of variant knowledge, inherited disease causing mutations, pharmacogenomic variants, and disease genes, drug targets and pathways.

Key facts

Founded

1997

Headquarters

Ellrich, Germany

Stage

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Industry

Enterprise Software & Infrastructure